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dynamics simulation interaction diagrams (sids)  (Molecular Dynamics Inc)

 
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    Molecular Dynamics Inc dynamics simulation interaction diagrams (sids)
    <t>Molecular</t> Dynamics simulation interaction diagrams <t>(SIDs)</t> are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.
    Dynamics Simulation Interaction Diagrams (Sids), supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/dynamics+simulation+interaction+diagrams+(sids)/simulation+interaction+diagram++sid+/pmc08323612-159-2-0
    Average 90 stars, based on 1 article reviews
    dynamics simulation interaction diagrams (sids) - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "Amide-Linked C4”-Saccharide Modification of KRN7000 Provides Potent Stimulation of Human Invariant NKT Cells and Anti-Tumor Immunity in a Humanized Mouse Model"

    Article Title: Amide-Linked C4”-Saccharide Modification of KRN7000 Provides Potent Stimulation of Human Invariant NKT Cells and Anti-Tumor Immunity in a Humanized Mouse Model

    Journal: ACS chemical biology

    doi: 10.1021/acschembio.0c00707

    Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.
    Figure Legend Snippet: Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.

    Techniques Used: Residue

    Related Articles

    Residue:

    Article Title: Amide-Linked C4”-Saccharide Modification of KRN7000 Provides Potent Stimulation of Human Invariant NKT Cells and Anti-Tumor Immunity in a Humanized Mouse Model
    Article Snippet: Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D).



    Similar Products

    dynamics simulation interaction diagrams (sids)  (Molecular Dynamics Inc)
    90
    Molecular Dynamics Inc dynamics simulation interaction diagrams (sids)
    <t>Molecular</t> Dynamics simulation interaction diagrams <t>(SIDs)</t> are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.
    Dynamics Simulation Interaction Diagrams (Sids), supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/dynamics+simulation+interaction+diagrams+(sids)/simulation+interaction+diagram++sid+/pmc08323612-159-2-0
    Average 90 stars, based on 1 article reviews
    dynamics simulation interaction diagrams (sids) - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.

    Journal: ACS chemical biology

    Article Title: Amide-Linked C4”-Saccharide Modification of KRN7000 Provides Potent Stimulation of Human Invariant NKT Cells and Anti-Tumor Immunity in a Humanized Mouse Model

    doi: 10.1021/acschembio.0c00707

    Figure Lengend Snippet: Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D). Percentages indicate the fraction of time a given residue interacts with the ligand. Only interactions with an occurrence larger than 30% are displayed. The bonds adjacent to the amide’s carbonyl group are highlighted as a thick orange line in panels A, B, and C for further discussion in Figure 7. Contour lines give an approximation to the protein cavity based on the strength of the ligand-protein interactions.

    Article Snippet: Molecular Dynamics simulation interaction diagrams (SIDs) are shown for the human CD1d-TCR complex containing 8 (A), 9 (B), 10 (C) or KRN7000 (D).

    Techniques: Residue